dbCAN-seq: a database of CAZyme sequence and annotation

Gene clsuter ID: MGYG000002209_26|CGC1
Gene ID: MGYG000002209_01534
Location and strand information: 11094 - 12263 (+)
Family: 1.B.6.1.6
Protein type: TC
Protein description: Outer membrane protein 40

Gene clsuter ID: MGYG000002209_26|CGC1
Gene ID: MGYG000002209_01535
Location and strand information: 12818 - 15169 (-)
Family: GH139
Protein type: CAZyme
Protein description: hypothetical protein
Protein isoelectric point: 7.2069
Protein molecular weight: 90848.85
NCBI Blastp with this gene.
Protein sequence: copy AA seq

Gene clsuter ID: MGYG000002209_26|CGC1
Gene ID: MGYG000002209_01536
Location and strand information: 16121 - 17824 (-)
Family: 8.A.46.1.3
Protein type: TC
Protein description: SusD-like protein

Gene clsuter ID: MGYG000002209_26|CGC1
Gene ID: MGYG000002209_01537
Location and strand information: 17845 - 20865 (-)
Family: 1.B.14.6.1
Protein type: TC
Protein description: TonB-dependent receptor SusC

Gene clsuter ID: MGYG000002209_26|CGC1
Gene ID: MGYG000002209_01538
Location and strand information: 21189 - 22814 (-)
Family: null
Protein type: null
Protein description: hypothetical protein

Gene clsuter ID: MGYG000002209_26|CGC1
Gene ID: MGYG000002209_01539
Location and strand information: 22825 - 24828 (-)
Family: PL0|PL33_1
Protein type: CAZyme
Protein description: hypothetical protein
Protein isoelectric point: 8.7669
Protein molecular weight: 76688.27
NCBI Blastp with this gene.
Protein sequence: copy AA seq

Gene clsuter ID: MGYG000002209_26|CGC1
Gene ID: MGYG000002209_01540
Location and strand information: 25407 - 25949 (+)
Family: Sigma70_r2+Sigma70_r4_2
Protein type: STP
Protein description: hypothetical protein

Gene clsuter ID: MGYG000002209_26|CGC1
Gene ID: MGYG000002209_01541
Location and strand information: 25997 - 27112 (+)
Family: FecR
Protein type: STP
Protein description: hypothetical protein

Gene clsuter ID: MGYG000002209_26|CGC1
Gene ID: MGYG000002209_01542
Location and strand information: 27182 - 30562 (+)
Family: 1.B.14.6.1
Protein type: TC
Protein description: hypothetical protein

Gene clsuter ID: MGYG000002209_26|CGC1
Gene ID: MGYG000002209_01543
Location and strand information: 30575 - 32020 (+)
Family: 8.A.46.3.3
Protein type: TC
Protein description: hypothetical protein

You are here: cgc-> ?help

CGC gene composition diagram

Gene composition table

Substrate predicted by dbCAN-PUL is pectin download this fig

Genomic location

Protein ID	Protein Name	Type	Start	End	Strand	Signature
MGYG000002209_01534	Outer membrane protein 40	TC	11094	12263	+	1.B.6.1.6
MGYG000002209_01535	hypothetical protein	CAZyme	12818	15169	-	GH139
MGYG000002209_01536	SusD-like protein	TC	16121	17824	-	8.A.46.1.3
MGYG000002209_01537	TonB-dependent receptor SusC	TC	17845	20865	-	1.B.14.6.1
MGYG000002209_01538	hypothetical protein	null	21189	22814	-	No domain
MGYG000002209_01539	hypothetical protein	CAZyme	22825	24828	-	PL0\| PL33_1
MGYG000002209_01540	hypothetical protein	STP	25407	25949	+	Sigma70_r2\| Sigma70_r4_2
MGYG000002209_01541	hypothetical protein	STP	25997	27112	+	FecR
MGYG000002209_01542	hypothetical protein	TC	27182	30562	+	1.B.14.6.1
MGYG000002209_01543	hypothetical protein	TC	30575	32020	+	8.A.46.3.3
Protein ID	Protein Name	Type	Start	End	Strand	Signature